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Author SHA1 Message Date
codex-bot 5fad2fc575 Merge main and preserve coverage and history audit checks
Metadata integrity checks / metadata (push) Successful in 1m17s
2026-11-08 14:53:20 +08:00
codex-bot fd3fdb6cf7 Aggregate coverage paper counts once per snapshot
Metadata integrity checks / metadata (push) Successful in 1m17s
2026-11-08 02:57:09 +08:00
codex-bot 346208a272 Audit current PostgreSQL conference coverage and decision history
Metadata integrity checks / metadata (push) Successful in 3m50s
2026-11-08 02:42:21 +08:00
20 changed files with 255 additions and 607 deletions
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@@ -49,11 +49,11 @@ jobs:
subprocess.run([str(venv/'bin/paper-atlas'),'--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','collect','cvf','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','maintain','postgres','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','maintain','event-identity','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','import','records','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','import','arxiv','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','maintain','backfill','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','audit','public-openreview','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','coverage','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-m','paper_atlas','audit','histories','--help'],cwd=outside,check=True)
subprocess.run([python,'-I','-B','-c','from paper_atlas.postgres.writer import PostgresStore, WriteConnection'],cwd=outside,check=True)
smoke = "from paper_atlas.db.store import Store; from paper_atlas.config import DEFAULT_REGISTRY; import json; assert {'COLM','MM','MLSys'} <= {v['acronym'] for v in json.loads(DEFAULT_REGISTRY.read_text())['venues']}; s=Store('installed.sqlite'); s.conn.close()"
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@@ -51,7 +51,8 @@ PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas query --pg-service fo
PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas query --pg-service foundry-research --paper 123
# 列出全部目标会议,包括尚未入库的项目
paper-atlas coverage --db /data/paper-index/papers.sqlite \
PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas coverage \
--pg-service foundry-research --pg-schema research \
--out /data/paper-index/collected/venue-coverage-current.json
# 采集与导入分开;这里只采集到独立文件
@@ -86,5 +87,3 @@ paper-atlas collect colm --cache /data/paper-index/raw/http-cache \
CI 在已授权的远程 runner 上运行测试、构建 wheel,并从源码目录外验证安装后的命令及随包资源。数据库全量去重和覆盖率是独立的数据验收步骤,不因代码测试通过而自动完成。
开发通过工作分支和 PR 交付,由用户手动合并。
同年多届的 `event_key`、显式迁移、旧文件刷新与查询边界见 [会议事件身份](docs/event-identity.md)。
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@@ -1,44 +0,0 @@
# 同年多届会议的事件身份
`venue`、`year`、`track` 描述系列、年份和投稿轨道;`event_key` 区分同系列、同年、同轨道的实际会议事件。例如 WWW 1995 的春季与秋季会议分别使用 `www-1995-spring` 和 `www-1995-fall`,两者仍是 `main`。相同论文可以在两届有不同投稿与决定;论文去重不会把这两次投稿合成一次。
普通单届数据继续使用空键。新输入在同一组已有具名事件或已知同年多届时必须提供明确键;不能任选第一个 edition。已有来源刷新可依据自己的原投稿关系回到原事件,不能被显式改到另一事件。精确固定 DBLP 快照、WWW Fall 书目名、1995 年及 `www1995f.html` 卷共同支持旧秋季文件的归属;不按标题猜年份或季节。
规范 JSONL 行及 manifest 都可提供 `event_key`,非空值限制为最多80个小写字母、数字及 `._:-`,首字符为字母或数字。manifest 提供键时,每行必须一致;一份文件仍仅对应一个事件及轨道。跨行冲突会回滚整份业务导入。身份回填同样按事件选择,不能借机把来源移到另一届。
## 新样本与既有数据
新建 SQLite 样本的 `editions` 唯一键为 `(venue_id, year, track, event_key)`。已有 SQLite/PostgreSQL 不会因普通读写命令自动升级。其普通单届导入继续可用;WWW1994/1995或带事件键的导入会要求先迁移。冻结的 SQLite 生产备份仍受 cutover 标记保护,不能写入或升级。
先在 PostgreSQL 生成只读计划:
```sh
PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas maintain event-identity \
--pg-service foundry-research --pg-schema research --out /data/paper-index/event-plan.json
```
检查计划的数据库身份、原 edition IDs、业务表数量、目标来源与历史指纹。精确计数在同一快照中按主键分页,每页最多5000行,只读取主键;不使用估计行数。CLI向stderr持续报告计数进度,避免大库长时间无输出。已有未标记 WWW1995 edition 必须逐投稿都有固定 DBLP Fall 卷证据,才会只为原 edition 填入 `www-1995-fall`;缺证或混合卷会拒绝计划。本文命令不表示生产已经迁移。
应用时传入同一文件及命令输出的文件 SHA256:
```sh
PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas maintain event-identity \
--pg-service foundry-research --pg-schema research \
--apply-plan /data/paper-index/event-plan.json --plan-sha256 PLAN_FILE_SHA256 \
--out /data/paper-index/event-applied.json
```
原生 PostgreSQL writer 使用现有 schema advisory lock,并在事务中锁定 editions,核对计划后添加列及替换唯一约束。SQLite 样本使用独占写事务,重建父表时保留 IDs,并在提交前检查外键;不级联删除子记录。额外列、未知唯一约束或 SQLite 额外索引会拒绝自动升级,须单独评估。未改变原版四列的排序内容哈希、任何业务表数量或目标投稿/决定/来源内容,才可提交;失败回滚。迁移标记与 DDL 同事务。原计划立即重试为 `already_applied`;若后续业务已经变化,应重新生成计划,不重放旧计划。
ECML 与 PKDD 的联合举办前事件已有不同 venue/edition,保持原身份即可。这项迁移不会把它们合并,也不会创建新的论文、投稿或决定。WWW 春季及1994两届的逐篇采集、来源核验和导入仍须另做。
## 查询与验收
```sh
paper-atlas query --pg-service foundry-research --pg-schema research \
--venue WWW --year 1995 --track main --event-key www-1995-fall
```
详细投稿历史及 `known_acceptances` 返回 `event_key`。`--event-key` 可与 `--status` 一起限定同一事件中的最新已知决定。未迁移的旧库仍可普通查询,其事件键为空;不能声称已经区分季节。`audit histories` 的新库事件输出也保留键。
远程测试应覆盖同一作品的两届独立投稿、拒稿后另一届录用、原 IDs 与 Unicode/NUL 来源内容保留、旧文件刷新、歧义及错误键拒绝、整文件回滚、明确事件的身份回填、旧计划失效、重试与真实 PostgreSQL 迁移。生产应用后还须独立核验约束、来源和历史、全文索引及 foundry-core 健康;单元测试不替代生产或最终全库去重验收。
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@@ -97,13 +97,16 @@ paper-atlas audit arxiv-tags --db /data/paper-index/papers.sqlite \
采集文件、已入库的来源记录和去重论文实体是不同的计数。来源可能覆盖同一篇论文,同一篇论文也可能有多次投稿;不能把各批文件数量相加作为独立论文总数。实时统计与覆盖报告使用:
```sh
paper-atlas query --db /data/paper-index/papers.sqlite --stats
paper-atlas coverage --db /data/paper-index/papers.sqlite \
PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas query --pg-service foundry-research --pg-schema research --stats
PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas coverage \
--pg-service foundry-research --pg-schema research \
--out /data/paper-index/collected/venue-coverage-current.json
```
manifest 和采集器状态清单用于确认文件是否齐全及是否缺摘要;`ingest_runs` 和协调器日志用于确认主库导入是否成功。官方程序、书目目录和公开投稿快照分别保留,未出现在某份清单不等于被拒稿;第三方快照也不能代表平台当前全量状态。代码测试成功不能代替最终全库去重、完整性和逐届覆盖核验。
`coverage` 的所有计数来自同一个只读快照。`latest_observed_status_counts` 按每次投稿的最新观察决定统计,`decision_observation_counts` 保留所有历史观察;重复来源不增加投稿数,缺少决定的投稿计入最新状态 unknown,但不凭空制造 unknown 决定。`source_record_counts` 统计来源在该届次的实际记录与缺摘要数,和 `sources` 中逐清单的预期/导入数量分开;身份补充清单与原始论文集清单可以描述同一条记录。来源缺摘要与论文实体从其他来源获得摘要也分别报告。报告仍将历史覆盖标为待独立审计,不能用某个清单 complete 或没有拒稿记录推断全会议覆盖。
当前代码与合并状态以 [Pull Requests](https://gitea.entroia.com/Zayden-Jung/paper-atlas/pulls) 为准;CI 结果以对应提交的 Actions 检查为准。工作分支交付后等待用户手动合并。合并代码不自动部署、不自动启动采集,也不代表数据批次已完成。
## 修正已有 PMLR 投稿的轨道
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@@ -83,11 +83,14 @@ paper-atlas query --pg-service foundry-research --query '"language model"' --lim
paper-atlas query --pg-service foundry-research --tag arxiv:category=cs.AI
paper-atlas query --pg-service foundry-research --venue ICLR --year 2025 --status rejected
paper-atlas query --pg-service foundry-research --paper 123
paper-atlas coverage --db /data/paper-index/papers.sqlite --out /data/paper-index/collected/coverage.json
PGSERVICEFILE=/etc/paper-atlas/pg_service.conf paper-atlas coverage \
--pg-service foundry-research --pg-schema research --out /data/paper-index/collected/coverage.json
```
`--status rejected` 筛选某次投稿的最新已知决定。它并不表示论文在所有会议均未录用;分析转投情况时查看该论文的完整投稿历史。年份表示会议届次,观察时间和决定日期分别保留。
覆盖报告使用只读一致性快照,标明实际数据库和 schema,并列出零入库目标与注册表外的已入库会议。逐届、逐 track 分别列出最新观察状态的投稿数、全部决定观察数、各来源记录数,以及来源摘要和论文实体摘要的缺失数。摘要缺失指 NULL 或空字符串;有文字不代表内容已经完整核验。同一来源的多个清单 URL 可以重叠,不能把清单计数相加当作来源总量;零条拒稿也不证明该会议没有公开拒稿。SQLite 样本仍可显式使用 `--db`,生产报告应查询当前 PostgreSQL。
例如,查找在 ICLR 有拒稿记录、但在其他已知投稿中已有录用的论文:
```sh
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@@ -1,45 +1,136 @@
"""Show every target venue, including those with no imported records."""
"""Describe imported venue coverage without implying a complete census."""
import argparse
from paper_atlas.config import DEFAULT_REGISTRY
from collections import defaultdict
import json
from pathlib import Path
import sqlite3
from paper_atlas.config import DEFAULT_REGISTRY
from paper_atlas.db.backend import database_arguments, open_read_connection
from paper_atlas.db.submissions import timestamp
from paper_atlas.querying import LATEST_DECISION
def report(db,registry):
registry=json.loads(Path(registry).read_text());targets=registry['venues']
names=[row['acronym'].casefold() for row in targets]
if len(names)!=len(set(names)):raise ValueError('Duplicate target venue')
scope='(v.acronym=? COLLATE NOCASE OR EXISTS(SELECT 1 FROM venue_aliases a WHERE a.venue_id=v.id AND a.alias=? COLLATE NOCASE))'
c=sqlite3.connect(Path(db).resolve().as_uri()+'?mode=ro',uri=True);c.row_factory=sqlite3.Row
STATUSES = ('accepted', 'rejected', 'desk_rejected', 'withdrawn', 'under_review', 'unknown')
def _status_counts(connection, *, latest):
if latest:
query = '''SELECT s.edition_id,COALESCE(d.status,'unknown') AS status,count(*) AS count
FROM submissions s LEFT JOIN decisions d ON d.submission_id=s.id AND ''' + LATEST_DECISION
else:
query = '''SELECT s.edition_id,COALESCE(d.status,'unknown') AS status,count(*) AS count
FROM submissions s JOIN decisions d ON d.submission_id=s.id'''
counts = defaultdict(dict)
for row in connection.execute(query + " GROUP BY s.edition_id,COALESCE(d.status,'unknown')"):
counts[row[0]][row[1]] = row[2]
return counts
def report(db, registry, *, pg_service=None, pg_schema=None):
started_at = timestamp()
registry = json.loads(Path(registry).read_text())
targets = registry['venues']
names = [row['acronym'].casefold() for row in targets]
if len(names) != len(set(names)):
raise ValueError('Duplicate target venue')
scope = '''(lower(v.acronym)=lower(?) OR EXISTS(
SELECT 1 FROM venue_aliases a WHERE a.venue_id=v.id AND lower(a.alias)=lower(?)))'''
connection = open_read_connection(db, pg_service=pg_service, pg_schema=pg_schema)
if not pg_service:
connection.row_factory = sqlite3.Row
try:
c.execute('BEGIN');venues=[]
if pg_service:
identity = connection.execute('SELECT current_database(),current_schema()').fetchone()
database, schema = identity[0], identity[1]
else:
database, schema = str(Path(db).resolve()), None
latest = _status_counts(connection, latest=True)
observations = _status_counts(connection, latest=False)
# Aggregate the paper join once for the whole snapshot. Repeating it
# for each registry target caused repeated scans on the production DB.
edition_counts = {}
for row in connection.execute('''SELECT s.edition_id,count(s.id) AS submissions,
count(DISTINCT s.paper_id) AS papers,
count(DISTINCT CASE WHEN p.abstract IS NULL OR p.abstract='' THEN s.paper_id END)
AS papers_without_abstract_text
FROM submissions s LEFT JOIN papers p ON p.id=s.paper_id GROUP BY s.edition_id'''):
entry = dict(row)
edition_counts[entry.pop('edition_id')] = entry
source_counts = defaultdict(list)
for row in connection.execute('''SELECT s.edition_id,so.name AS source,
count(DISTINCT sr.id) AS source_records,
count(DISTINCT CASE WHEN sr.abstract IS NULL OR sr.abstract='' THEN sr.id END)
AS source_records_without_abstract_text
FROM submission_sources ss JOIN submissions s ON s.id=ss.submission_id
JOIN source_records sr ON sr.id=ss.source_record_id JOIN sources so ON so.id=sr.source_id
GROUP BY s.edition_id,so.name ORDER BY s.edition_id,so.name'''):
entry = dict(row)
source_counts[entry.pop('edition_id')].append(entry)
venues, covered_venue_ids = [], set()
for target in targets:
acronym=target['acronym'];params=(acronym,acronym)
editions=[]
for row in c.execute('SELECT e.id,v.acronym AS canonical_venue,e.year,e.track,count(s.id) AS submissions,count(DISTINCT s.paper_id) AS papers FROM editions e JOIN venues v ON v.id=e.venue_id LEFT JOIN submissions s ON s.edition_id=e.id WHERE '+scope+' GROUP BY e.id ORDER BY e.year,e.track',params):
edition=dict(row)
edition['sources']=[dict(source) for source in c.execute('SELECT so.name,es.status,es.expected_count,es.imported_count,es.list_url,es.last_success_at,es.last_error FROM edition_sources es JOIN sources so ON so.id=es.source_id WHERE es.edition_id=? ORDER BY so.name',(row['id'],))]
acronym = target['acronym']
params = (acronym, acronym)
editions = []
for row in connection.execute('''SELECT e.id,v.id AS venue_id,v.acronym AS canonical_venue,
e.year,e.track FROM editions e JOIN venues v ON v.id=e.venue_id
WHERE ''' + scope + '''
ORDER BY e.year,e.track,v.acronym''', params):
edition = dict(row)
edition.update(edition_counts.get(row['id'], {
'submissions': 0, 'papers': 0, 'papers_without_abstract_text': 0}))
covered_venue_ids.add(edition['venue_id'])
edition['latest_observed_status_counts'] = {status: latest[row['id']].get(status, 0) for status in STATUSES}
edition['decision_observation_counts'] = {status: observations[row['id']].get(status, 0) for status in STATUSES}
edition['source_record_counts'] = source_counts[row['id']]
edition['sources'] = [dict(source) for source in connection.execute('''SELECT so.name,
es.status,es.expected_count,es.imported_count,es.list_url,es.last_success_at,es.last_error
FROM edition_sources es JOIN sources so ON so.id=es.source_id
WHERE es.edition_id=? ORDER BY so.name,es.list_url''', (row['id'],))]
editions.append(edition)
totals=c.execute('SELECT count(s.id),count(DISTINCT s.paper_id) FROM submissions s JOIN editions e ON e.id=s.edition_id JOIN venues v ON v.id=e.venue_id WHERE '+scope,params).fetchone()
venues.append({'acronym':acronym,'field':target['field'],'imported_submissions':totals[0],'distinct_papers':totals[1],
'history_status':'partial_history_pending_independent_audit' if totals[0] else 'no_imported_records',
'discovery_sources':target.get('discovery_sources',[]),'editions':editions})
return {'checked_at':timestamp(),'target_venue_count':len(targets),'venues_with_imported_records':sum(bool(v['imported_submissions']) for v in venues),
'scope_note':registry['scope_note'],'interpretation':'All registry targets are listed. Edition source complete means that source file passed import checks; it does not prove full historical or abstract coverage. Papers can appear in multiple venues/years, so do not sum venue paper counts as a global total.',
'venues':venues}
finally:c.close()
totals = connection.execute('''SELECT count(s.id),count(DISTINCT s.paper_id)
FROM submissions s JOIN editions e ON e.id=s.edition_id
JOIN venues v ON v.id=e.venue_id WHERE ''' + scope, params).fetchone()
venues.append({'acronym': acronym, 'field': target['field'],
'imported_submissions': totals[0], 'distinct_papers': totals[1],
'history_status': 'partial_history_pending_independent_audit' if totals[0] else 'no_imported_records',
'discovery_sources': target.get('discovery_sources', []), 'editions': editions})
outside_registry = [dict(row) for row in connection.execute('''SELECT v.id AS venue_id,
v.acronym,count(s.id) AS submissions,count(DISTINCT s.paper_id) AS papers
FROM submissions s JOIN editions e ON e.id=s.edition_id JOIN venues v ON v.id=e.venue_id
GROUP BY v.id,v.acronym ORDER BY v.acronym''') if row[0] not in covered_venue_ids]
return {'report_started_at': started_at, 'checked_at': timestamp(),
'engine': 'postgresql' if pg_service else 'sqlite', 'database': database, 'schema': schema,
'pg_service': pg_service, 'target_venue_count': len(targets),
'venues_with_imported_records': sum(bool(v['imported_submissions']) for v in venues),
'scope_note': registry['scope_note'],
'interpretation': 'All registry targets are listed, including zero imports. '
'Latest status counts use the latest observed decision for each attempt; decision observations retain history. '
'Source record totals are per source and edition, not per list URL; multiple list entries may describe overlapping records. '
'Missing abstract text means NULL or empty string; nonempty text does not prove a complete abstract. '
'An edition source marked complete is not a proof of complete conference history or public rejection coverage. '
'Zero imported rejections does not establish that no rejections are public. '
'Papers can appear in several venues/years; do not sum venue paper counts as a global total.',
'venues': venues, 'imported_venues_outside_registry': outside_registry}
finally:
connection.close()
def main(argv=None, *, prog=None):
parser=argparse.ArgumentParser(prog=prog);parser.add_argument('--db',required=True)
parser.add_argument('--registry',default=str(DEFAULT_REGISTRY));parser.add_argument('--out')
args=parser.parse_args(argv);result=report(args.db,args.registry);text=json.dumps(result,ensure_ascii=False,indent=2)
parser = argparse.ArgumentParser(prog=prog)
database_arguments(parser)
parser.add_argument('--registry', default=str(DEFAULT_REGISTRY))
parser.add_argument('--out')
args = parser.parse_args(argv)
result = report(args.db, args.registry, pg_service=args.pg_service, pg_schema=args.pg_schema)
text = json.dumps(result, ensure_ascii=False, indent=2)
if args.out:
path=Path(args.out);stage=path.with_suffix('.part');stage.write_text(text+'\n');stage.replace(path)
else:print(text)
path = Path(args.out)
stage = path.with_suffix('.part')
stage.write_text(text + '\n')
stage.replace(path)
else:
print(text)
if __name__ == '__main__':
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@@ -124,11 +124,7 @@ def report(db=None, *, pg_service=None, pg_schema=None, examples=20):
sample_attempts.append(rows)
current = []
from paper_atlas.db.events import has_event_key
attempts_sql = ATTEMPTS
if has_event_key(connection):
attempts_sql = attempts_sql.replace('e.year,e.track,', 'e.year,e.track,e.event_key,', 1).replace('e.year,e.track\n', 'e.year,e.track,e.event_key\n')
for raw in connection.execute(attempts_sql):
for raw in connection.execute(ATTEMPTS):
row = dict(raw)
if current and row['paper_id'] != current[0]['paper_id']:
consume(current)
-1
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@@ -25,7 +25,6 @@ COMMANDS = {
('catalogue','dblp'): ('paper_atlas.collectors.dblp', {}, '盘点 DBLP 历史会议目录'),
('import','arxiv'): ('paper_atlas.ingestion.arxiv', {}, '导入 arXiv 元数据 ZIP'),
('import','records'): ('paper_atlas.ingestion.records', {}, '导入核验过的会议文件'),
('maintain','event-identity'): ('paper_atlas.ingestion.event_identity', {}, '按核验计划增加同年会议事件身份'),
('maintain','merge'): ('paper_atlas.ingestion.maintenance', {}, '协调单写入合并与恢复'),
('maintain','backfill'): ('paper_atlas.ingestion.backfill', {}, '回填既有投稿的来源身份'),
('maintain','arxiv-tags'): ('paper_atlas.ingestion.arxiv_tags', {}, '恢复逐来源记录的 arXiv 类别证据'),
-71
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@@ -1,71 +0,0 @@
"""Stable event identity within a venue/year/track, independent of paper identity."""
import json
import re
def has_event_key(c):
if getattr(c, 'postgres', False):
return bool(c.execute("SELECT 1 FROM information_schema.columns WHERE table_schema=current_schema() AND table_name='editions' AND column_name='event_key'").fetchone())
return any(row[1] == 'event_key' for row in c.execute('PRAGMA table_info(editions)'))
def validate_event_key(value):
if value is not None and (not isinstance(value, str) or
(value != '' and not re.fullmatch(r'[a-z0-9][a-z0-9._:-]{0,79}', value))):
raise ValueError('Invalid conference event_key')
return value
def pinned_www_fall(source, metadata):
from paper_atlas.collectors.dblp import XML_SHA
b = metadata.get('bibliography') or {}
urls = b.get('url') or []
return (source == 'dblp' and metadata.get('snapshot_sha256') == XML_SHA
and metadata.get('bibliographic_year') == 1995
and str(metadata.get('proceedings_key', '')).startswith('conf/www/')
and b.get('booktitle') == ['WWW (Fall)'] and len(urls) == 1
and urls[0].split('#')[0] == 'db/conf/www/www1995f.html')
def find_edition(store, venue_id, venue, year, track, record, external_id,
event_key=None, *, create=True):
c = store.conn
validate_event_key(event_key)
enabled = has_event_key(c) if getattr(store, 'event_identity', None) is None else store.event_identity
known_multi = venue.upper() == 'WWW' and int(year) in (1994, 1995)
source = c.execute('SELECT src.name,r.metadata_json FROM source_records r JOIN sources src ON src.id=r.source_id WHERE r.id=?', (record,)).fetchone()
inferred = ('www-1995-fall' if known_multi and int(year) == 1995 and source
and pinned_www_fall(source[0], json.loads(source[1])) else None)
if inferred:
if event_key is not None and event_key != inferred:
raise ValueError('event_key conflicts with pinned WWW Fall source evidence')
event_key = inferred
if not enabled:
if event_key or known_multi:
raise ValueError('Explicit event identity migration required before this conference import')
row = c.execute('SELECT id FROM editions WHERE venue_id=? AND year=? AND track=?', (venue_id, year, track)).fetchone()
if row or not create:
return row[0] if row else None
c.execute('INSERT INTO editions(venue_id,year,track) VALUES(?,?,?) ON CONFLICT DO NOTHING', (venue_id, year, track))
return c.execute('SELECT id FROM editions WHERE venue_id=? AND year=? AND track=?', (venue_id, year, track)).fetchone()[0]
anchored = c.execute('''SELECT DISTINCT e.id,e.event_key FROM editions e JOIN submissions s ON s.edition_id=e.id
JOIN submission_sources ss ON ss.submission_id=s.id WHERE e.venue_id=? AND e.year=? AND e.track=?
AND ss.source_record_id=? AND ss.source_submission_id=?''', (venue_id, year, track, record, external_id)).fetchall()
if len(anchored) > 1:
raise ValueError('Source record already has ambiguous conference events')
if anchored:
if event_key is not None and event_key != anchored[0][1]:
raise ValueError('Cannot move an existing source to another conference event')
event_key = anchored[0][1]
if event_key is None:
rows = c.execute('SELECT event_key FROM editions WHERE venue_id=? AND year=? AND track=?', (venue_id, year, track)).fetchall()
if len(rows) > 1 or any(row[0] for row in rows):
raise ValueError('Explicit event_key required; conference event is ambiguous')
event_key = ''
if known_multi and not event_key:
raise ValueError('Explicit event_key required for same-year WWW events')
row = c.execute('SELECT id FROM editions WHERE venue_id=? AND year=? AND track=? AND event_key=?', (venue_id, year, track, event_key)).fetchone()
if row or not create:
return row[0] if row else None
c.execute('INSERT INTO editions(venue_id,year,track,event_key) VALUES(?,?,?,?) ON CONFLICT DO NOTHING', (venue_id, year, track, event_key))
return c.execute('SELECT id FROM editions WHERE venue_id=? AND year=? AND track=? AND event_key=?', (venue_id, year, track, event_key)).fetchone()[0]
+1 -2
View File
@@ -29,8 +29,7 @@ CREATE TABLE IF NOT EXISTS venues (
CREATE TABLE IF NOT EXISTS editions (
id INTEGER PRIMARY KEY, venue_id INTEGER NOT NULL REFERENCES venues(id),
year INTEGER NOT NULL, track TEXT NOT NULL DEFAULT 'main',
event_key TEXT NOT NULL DEFAULT '',
UNIQUE(venue_id,year,track,event_key)
UNIQUE(venue_id,year,track)
);
CREATE TABLE IF NOT EXISTS venue_aliases (
venue_id INTEGER NOT NULL REFERENCES venues(id), alias TEXT NOT NULL,
+3 -5
View File
@@ -36,8 +36,6 @@ class Store:
self.conn.execute('PRAGMA synchronous=NORMAL')
self.conn.execute('PRAGMA cache_size=-32768')
migrate_sources(self.conn)
from paper_atlas.db.events import has_event_key
self.event_identity = has_event_key(self.conn)
def source(self,name,url):
self.conn.execute('INSERT INTO sources(name,homepage) VALUES(?,?) ON CONFLICT DO NOTHING',(name,url))
@@ -144,15 +142,15 @@ class Store:
tag=c.execute('SELECT id FROM tags WHERE namespace=? AND value=?',(namespace,value)).fetchone()[0]
c.execute('INSERT INTO paper_tags VALUES(?,?,?,?) ON CONFLICT DO NOTHING',(paper,tag,record,evidence))
def decision(self,paper,record,venue,year,track,external_id,url,status,raw_value,aliases=None,identities=None,observed_at=None,decision_date=None,source_decision_id='',submitted_at=None,guard_status=False,event_key=None):
def decision(self,paper,record,venue,year,track,external_id,url,status,raw_value,aliases=None,identities=None,observed_at=None,decision_date=None,source_decision_id='',submitted_at=None,guard_status=False):
c = self.conn
existing=c.execute('SELECT id FROM venues WHERE lower(acronym)=lower(?)',(venue,)).fetchone()
if existing:venue_id=existing[0]
else:venue_id=inserted_id(c,"INSERT INTO venues(acronym,name,field,venue_type) VALUES(?,?,?,'conference')",(venue,venue,'unclassified'))
for alias in aliases or []:
c.execute('INSERT INTO venue_aliases VALUES(?,?) ON CONFLICT DO NOTHING',(venue_id,alias))
from paper_atlas.db.events import find_edition
edition = find_edition(self,venue_id,venue,int(year),track,record,external_id,event_key)
c.execute('INSERT INTO editions(venue_id,year,track) VALUES(?,?,?) ON CONFLICT DO NOTHING',(venue_id,int(year),track))
edition = c.execute('SELECT id FROM editions WHERE venue_id=? AND year=? AND track=?',(venue_id,int(year),track)).fetchone()[0]
# A previous event in this row may already have merged the input paper.
paper=c.execute('SELECT paper_id FROM source_records WHERE id=?',(record,)).fetchone()[0]
submission=attach_submission(self,edition,paper,record,external_id,identities or [])
+1 -6
View File
@@ -37,14 +37,9 @@ def backfill(db,files, *, pg_service=None, pg_schema=None):
seen.add(row['external_id'])
if any(row.get(key)!=manifest.get(key) for key in ('source','venue','year','track')):
raise ValueError('Evidence row differs from edition manifest')
if 'event_key' in manifest and row.get('event_key')!=manifest['event_key']:
raise ValueError('Event identity differs from manifest')
require_track_record(row, manifest)
record=c.execute('SELECT r.id,r.paper_id,r.metadata_json FROM source_records r JOIN sources s ON s.id=r.source_id WHERE s.name=? AND r.external_id=?',(row['source'],row['external_id'])).fetchone()
from paper_atlas.db.events import find_edition
venue=c.execute('SELECT id FROM venues WHERE lower(acronym)=lower(?)',(row['venue'],)).fetchone()
eid=find_edition(store,venue[0],row['venue'],row['year'],row['track'],record[0],row['external_id'],row.get('event_key'),create=False) if record and venue else None
edition=(eid,) if eid is not None else None
edition=c.execute('SELECT e.id FROM editions e JOIN venues v ON v.id=e.venue_id WHERE lower(v.acronym)=lower(?) AND e.year=? AND e.track=?',(row['venue'],row['year'],row['track'])).fetchone()
if not record or not edition:raise ValueError('Evidence backfill requires an already imported record and edition')
if not c.execute('SELECT 1 FROM submission_sources ss JOIN submissions s ON s.id=ss.submission_id WHERE ss.source_record_id=? AND ss.source_submission_id=? AND s.edition_id=?',(record[0],row['external_id'],edition[0])).fetchone():
raise ValueError('No existing submission to backfill')
-217
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@@ -1,217 +0,0 @@
"""Explicit, plan-bound edition event-key upgrade; never reimport submissions."""
import argparse
from contextlib import closing
import hashlib
import json
from pathlib import Path
import sqlite3
import sys
from paper_atlas.db.backend import database_arguments, open_read_connection, require_sqlite_writable
from paper_atlas.db.events import has_event_key, pinned_www_fall
from paper_atlas.postgres.schema import TABLES, quote
MARKER = 'edition_event_identity_v1:'
def digest(value):
return hashlib.sha256(json.dumps(value, ensure_ascii=False, sort_keys=True, separators=(',', ':')).encode()).hexdigest()
def values(rows):
return [[r[i] for i in range(len(r))] for r in rows]
def exact_counts(c, *, page_size=5000, progress=None):
"""Count every row in the same snapshot through bounded primary-key pages."""
if not isinstance(page_size, int) or page_size < 1:
raise ValueError('Positive count page size required')
result = {}
for table in TABLES:
if table == 'schema_migrations':
continue
if getattr(c, 'postgres', False):
columns = [r[0] for r in c.execute("SELECT a.attname FROM pg_constraint pc JOIN pg_attribute a ON a.attrelid=pc.conrelid AND a.attnum=ANY(pc.conkey) WHERE pc.conrelid=?::regclass AND pc.contype='p' ORDER BY array_position(pc.conkey,a.attnum)", (table,))]
else:
columns = [r[1] for r in sorted(c.execute('PRAGMA table_info('+quote(table)+')'), key=lambda r:r[5]) if r[5]]
if not columns:
raise ValueError('Primary key required for exact count: '+table)
fields = ','.join(quote(column) for column in columns)
last = None; count = 0; pages = 0
if progress:
progress({'table':table, 'rows_counted':0, 'complete':False})
while True:
where = (' WHERE ('+fields+') > ('+','.join('?' for _ in columns)+')') if last is not None else ''
batch = values(c.execute('SELECT '+fields+' FROM '+quote(table)+where+' ORDER BY '+fields+' LIMIT ?', (*last, page_size) if last is not None else (page_size,)).fetchall())
count += len(batch); pages += 1
complete = len(batch) < page_size
if progress and (complete or pages % 20 == 0):
progress({'table':table, 'rows_counted':count, 'complete':complete})
if complete:
break
last = batch[-1]
result[table] = count
return result
def inspect(c, *, progress=None):
enabled = has_event_key(c)
if getattr(c, 'postgres', False):
columns = [r[0] for r in c.execute("SELECT column_name FROM information_schema.columns WHERE table_schema=current_schema() AND table_name='editions' ORDER BY ordinal_position")]
unique = [r[0] for r in c.execute("SELECT pg_get_constraintdef(oid) FROM pg_constraint WHERE conrelid='editions'::regclass AND contype='u'")]
expected_unique = ['UNIQUE (venue_id, year, track, event_key)' if enabled else 'UNIQUE (venue_id, year, track)']
else:
columns = [r[1] for r in c.execute('PRAGMA table_info(editions)')]
indexes = list(c.execute('PRAGMA index_list(editions)'))
unique = [tuple(r[2] for r in c.execute('PRAGMA index_info('+quote(index[1])+')')) for index in indexes if index[2]]
expected_unique = [('venue_id','year','track','event_key') if enabled else ('venue_id','year','track')]
if len(indexes) != 1:
raise ValueError('Unexpected edition indexes; require a reviewed migration')
if columns != ['id','venue_id','year','track'] + (['event_key'] if enabled else []) or unique != expected_unique:
raise ValueError('Unexpected edition schema; require a reviewed migration')
rows = values(c.execute('SELECT id,venue_id,year,track FROM editions ORDER BY id'))
keys = values(c.execute('SELECT id,event_key FROM editions ORDER BY id')) if enabled else [[r[0], ''] for r in rows]
counts = exact_counts(c, progress=progress)
targets = values(c.execute("SELECT e.id FROM editions e JOIN venues v ON v.id=e.venue_id WHERE v.acronym='WWW' AND e.year=1995 AND e.track='main' ORDER BY e.id"))
assignments = []
for (eid,) in targets:
current_key = dict(keys)[eid]
if current_key:
continue
evidence = values(c.execute('''SELECT s.id,src.name,r.id,r.external_id,r.metadata_json FROM submissions s
JOIN submission_sources ss ON ss.submission_id=s.id JOIN source_records r ON r.id=ss.source_record_id
JOIN sources src ON src.id=r.source_id WHERE s.edition_id=? ORDER BY s.id,r.id''', (eid,)))
count = c.execute('SELECT count(*) FROM submissions WHERE edition_id=?', (eid,)).fetchone()[0]
supported = {r[0] for r in evidence if pinned_www_fall(r[1], json.loads(r[4]))}
if not count or len(supported) != count:
raise ValueError('Existing unlabelled WWW1995 edition lacks complete pinned Fall evidence')
assignments.append({'edition_id':eid, 'event_key':'www-1995-fall', 'submissions':count,
'source_evidence_sha256':digest(evidence)})
# Protect all rows in the affected attempt history, including non-DBLP evidence.
target_ids = [r[0] for r in targets]
protected = {}
for table,sql in {
'submissions': 'SELECT s.* FROM submissions s WHERE s.edition_id IN ({}) ORDER BY s.id',
'decisions': 'SELECT d.* FROM decisions d JOIN submissions s ON s.id=d.submission_id WHERE s.edition_id IN ({}) ORDER BY d.id',
'submission_sources': 'SELECT ss.* FROM submission_sources ss JOIN submissions s ON s.id=ss.submission_id WHERE s.edition_id IN ({}) ORDER BY ss.submission_id,ss.source_record_id,ss.source_submission_id',
'decision_sources': 'SELECT ds.* FROM decision_sources ds JOIN decisions d ON d.id=ds.decision_id JOIN submissions s ON s.id=d.submission_id WHERE s.edition_id IN ({}) ORDER BY ds.decision_id,ds.source_record_id,ds.source_decision_id',
'source_records': 'SELECT DISTINCT r.* FROM source_records r JOIN submission_sources ss ON ss.source_record_id=r.id JOIN submissions s ON s.id=ss.submission_id WHERE s.edition_id IN ({}) ORDER BY r.id',
}.items():
records = values(c.execute(sql.format(','.join('?' for _ in target_ids)), target_ids)) if target_ids else []
protected[table] = {'count':len(records), 'sha256':digest(records)}
return {'event_column':enabled, 'editions_sha256':digest(rows), 'edition_ids':[r[0] for r in rows],
'event_keys':keys, 'counts':counts, 'assignments':assignments, 'protected':protected}
def database_identity(c, db=None):
if getattr(c, 'postgres', False):
r = c.execute('SELECT current_database(),current_schema()').fetchone()
return {'engine':'postgres', 'database':r[0], 'schema':r[1]}
return {'engine':'sqlite', 'path':str(Path(db).resolve())}
def plan(db=None, *, pg_service=None, pg_schema=None, progress=None):
with closing(open_read_connection(db, pg_service=pg_service, pg_schema=pg_schema)) as c:
return {'format':1, 'database':database_identity(c, db), 'before':inspect(c, progress=progress)}
def apply_plan(c, proposal, *, progress=None):
before = proposal['before']
if proposal.get('format') != 1:
raise ValueError('Unsupported event identity plan')
if getattr(c, 'postgres', False):
c.execute('LOCK TABLE editions IN ACCESS EXCLUSIVE MODE')
current = inspect(c, progress=progress)
signature = digest(proposal)
marker = MARKER + signature
if c.execute('SELECT 1 FROM schema_migrations WHERE name=?', (marker,)).fetchone():
expected_keys = dict(before['event_keys'])
expected_keys.update({a['edition_id']:a['event_key'] for a in before['assignments']})
if (not current['event_column'] or current['editions_sha256'] != before['editions_sha256']
or current['protected'] != before['protected'] or current['counts'] != before['counts']
or dict(current['event_keys']) != expected_keys):
raise ValueError('Applied plan no longer matches current data; generate a new plan')
return {'status':'already_applied', 'updated_editions':0, 'after':current}
if current != before:
raise ValueError('Event identity plan is stale; generate a new plan')
if not current['event_column']:
if getattr(c, 'postgres', False):
constraints = c.execute("SELECT conname,pg_get_constraintdef(oid) FROM pg_constraint WHERE conrelid='editions'::regclass AND contype='u'").fetchall()
matches = [name for name,definition in constraints if definition == 'UNIQUE (venue_id, year, track)']
if len(matches) != 1 or len(constraints) != 1:
raise ValueError('Unexpected legacy edition uniqueness')
c.execute("ALTER TABLE editions ADD COLUMN event_key TEXT COLLATE \"C\" NOT NULL DEFAULT ''")
c.execute('ALTER TABLE editions DROP CONSTRAINT '+quote(matches[0]))
c.execute('ALTER TABLE editions ADD CONSTRAINT editions_event_identity_unique UNIQUE(venue_id,year,track,event_key)')
else:
unique = [tuple(r[2] for r in c.execute('PRAGMA index_info('+quote(index[1])+')'))
for index in c.execute('PRAGMA index_list(editions)') if index[2]]
if unique != [('venue_id','year','track')]:
raise ValueError('Unexpected legacy edition uniqueness')
c.execute("CREATE TABLE editions_event_upgrade(id INTEGER PRIMARY KEY,venue_id INTEGER NOT NULL REFERENCES venues(id),year INTEGER NOT NULL,track TEXT NOT NULL DEFAULT 'main',event_key TEXT NOT NULL DEFAULT '',UNIQUE(venue_id,year,track,event_key))")
c.execute('INSERT INTO editions_event_upgrade(id,venue_id,year,track) SELECT id,venue_id,year,track FROM editions')
c.execute('DROP TABLE editions')
c.execute('ALTER TABLE editions_event_upgrade RENAME TO editions')
for item in before['assignments']:
result = c.execute("UPDATE editions SET event_key=? WHERE id=? AND event_key=''", (item['event_key'],item['edition_id']))
if result.rowcount != 1:
raise ValueError('Edition assignment changed during upgrade')
c.execute('INSERT INTO schema_migrations(name) VALUES(?)', (marker,))
after = inspect(c, progress=progress)
expected_keys = dict(before['event_keys'])
expected_keys.update({a['edition_id']:a['event_key'] for a in before['assignments']})
if (after['editions_sha256'] != before['editions_sha256'] or after['protected'] != before['protected']
or after['counts'] != before['counts'] or dict(after['event_keys']) != expected_keys):
raise ValueError('Event upgrade changed protected data')
if not getattr(c, 'postgres', False) and c.execute('PRAGMA foreign_key_check').fetchall():
raise ValueError('Foreign key violation after event upgrade')
return {'status':'applied', 'updated_editions':len(before['assignments']), 'after':after}
def upgrade(proposal, db=None, *, pg_service=None, pg_schema=None, progress=None):
if pg_service:
from paper_atlas.postgres.writer import WriteConnection
with closing(WriteConnection(pg_service, pg_schema)) as c:
if proposal['database'] != database_identity(c):
raise ValueError('Plan targets a different database')
try:
result = apply_plan(c, proposal, progress=progress); c.commit(); return result
except BaseException:
c.rollback(); raise
require_sqlite_writable(db)
if not Path(db).is_file():
raise ValueError('Existing SQLite sample required')
with closing(sqlite3.connect(db, timeout=30)) as c:
if proposal['database'] != database_identity(c, db):
raise ValueError('Plan targets a different database')
c.execute('PRAGMA foreign_keys=OFF') # Outside the transaction; no cascading deletes.
try:
c.execute('BEGIN IMMEDIATE')
result = apply_plan(c, proposal, progress=progress); c.commit(); return result
except BaseException:
c.rollback(); raise
finally:
c.execute('PRAGMA foreign_keys=ON')
def main(argv=None, *, prog=None):
p = argparse.ArgumentParser(prog=prog); database_arguments(p)
p.add_argument('--out', required=True)
p.add_argument('--apply-plan'); p.add_argument('--plan-sha256')
args = p.parse_args(argv)
if bool(args.apply_plan) != bool(args.plan_sha256):
p.error('--apply-plan and --plan-sha256 must be supplied together')
target = Path(args.out)
if target.exists():
raise ValueError('Refusing to overwrite an existing plan/report')
progress = lambda event: print(json.dumps({'phase':'exact_row_count', **event}), file=sys.stderr, flush=True)
if args.apply_plan:
raw = Path(args.apply_plan).read_bytes()
if hashlib.sha256(raw).hexdigest() != args.plan_sha256:
raise ValueError('Plan file SHA256 differs from approved bytes')
result = upgrade(json.loads(raw), args.db, pg_service=args.pg_service, pg_schema=args.pg_schema, progress=progress)
else:
result = plan(args.db, pg_service=args.pg_service, pg_schema=args.pg_schema, progress=progress)
target.write_text(json.dumps(result, ensure_ascii=False, indent=2)+'\n')
print(json.dumps({'out':str(target), 'sha256':hashlib.sha256(target.read_bytes()).hexdigest(),
'status':result.get('status','planned')}), flush=True)
+2 -4
View File
@@ -42,11 +42,9 @@ def ingest_file(db,path, *, pg_service=None, pg_schema=None):
row = json.loads(line)
if row['source'] != source_name:
raise ValueError('Source differs from manifest')
if any(key in manifest and manifest[key]!=row.get(key) for key in ('venue','year','track','event_key')):
if any(key in manifest and manifest[key]!=row[key] for key in ('venue','year','track')):
raise ValueError('Conference edition differs from manifest')
require_track_record(row, manifest)
from paper_atlas.db.events import validate_event_key
validate_event_key(row.get('event_key'))
external = row['external_id']
if external in seen:
raise ValueError('Duplicate external ID in one collected file: '+external)
@@ -67,7 +65,7 @@ def ingest_file(db,path, *, pg_service=None, pg_schema=None):
status=event['status']
if events and status is None:raise ValueError('Explicit decision event requires a status')
if status is not None and status not in ('accepted','rejected','desk_rejected','withdrawn','under_review','unknown'):raise ValueError('Unsupported decision event')
edition=store.decision(paper,record,row['venue'],row['year'],row['track'],external,event.get('evidence_url',row['url']),status,event.get('raw_value',''),row.get('venue_aliases'),identities=identities,observed_at=event.get('observed_at') or row_observed,decision_date=event.get('decision_date'),source_decision_id=event.get('source_decision_id',''),submitted_at=row.get('submitted_at'),guard_status=source_name in (PUBLIC_SOURCE,ARCHIVE_SOURCE),event_key=row.get('event_key'))
edition=store.decision(paper,record,row['venue'],row['year'],row['track'],external,event.get('evidence_url',row['url']),status,event.get('raw_value',''),row.get('venue_aliases'),identities=identities,observed_at=event.get('observed_at') or row_observed,decision_date=event.get('decision_date'),source_decision_id=event.get('source_decision_id',''),submitted_at=row.get('submitted_at'),guard_status=source_name in (PUBLIC_SOURCE,ARCHIVE_SOURCE))
editions.add(edition)
else:
raise ValueError('This importer requires an explicit supported decision status')
-2
View File
@@ -85,5 +85,3 @@ class WriteConnection:
class PostgresStore(Store):
def __init__(self, service, schema=None):
self.conn = WriteConnection(service, schema)
from paper_atlas.db.events import has_event_key
self.event_identity = has_event_key(self.conn)
+3 -13
View File
@@ -14,9 +14,7 @@ ACCEPTED_PAPERS = "SELECT s.paper_id FROM submissions s JOIN decisions d ON d.su
def known_acceptances(conn,paper):
from paper_atlas.db.events import has_event_key
event = 'e.event_key' if has_event_key(conn) else "''"
return [dict(row) for row in conn.execute('''SELECT s.id AS submission_id,v.acronym AS venue,e.year,e.track,'''+event+''' AS event_key,
return [dict(row) for row in conn.execute('''SELECT s.id AS submission_id,v.acronym AS venue,e.year,e.track,
d.id AS decision_id,d.decision_date,d.observed_at,d.evidence_url
FROM submissions s JOIN editions e ON e.id=s.edition_id JOIN venues v ON v.id=e.venue_id
JOIN decisions d ON d.submission_id=s.id WHERE s.paper_id=? AND d.status='accepted' AND '''+LATEST_DECISION+
@@ -35,7 +33,6 @@ def main(argv=None, *, prog=None):
parser.add_argument('--venue', help='Conference acronym')
parser.add_argument('--year', type=int)
parser.add_argument('--track',help='Exact track, e.g. main, findings, workshop')
parser.add_argument('--event-key',help='Exact event within a venue/year/track')
parser.add_argument('--status', choices=['accepted','rejected','desk_rejected','withdrawn','under_review','unknown'])
parser.add_argument('--outcome',choices=['accepted','no_known_acceptance'],help='跨会议的已知录用情况;未查到录用不等于从未录用')
parser.add_argument('--limit', type=int, default=20)
@@ -50,11 +47,6 @@ def main(argv=None, *, prog=None):
conn = sqlite3.connect(Path(args.db).resolve().as_uri()+'?mode=ro', uri=True)
conn.row_factory = sqlite3.Row
conn.execute('BEGIN') # One consistent read snapshot while ingestion continues.
from paper_atlas.db.events import has_event_key
event = 'e.event_key' if has_event_key(conn) else "''"
if args.event_key is not None and event == "''":
conn.close()
raise ValueError('Event identity migration required for event-key queries')
if args.stats:
result = {name:conn.execute('SELECT count(*) FROM '+name).fetchone()[0] for name in ('papers','source_records','submissions','decisions','tags','match_candidates')}
result['records_by_source'] = [dict(r) for r in conn.execute('SELECT s.name,count(r.id) AS imported_records FROM sources s LEFT JOIN source_records r ON r.source_id=s.id GROUP BY s.id ORDER BY s.name')]
@@ -81,15 +73,13 @@ def main(argv=None, *, prog=None):
where.append('EXISTS(SELECT 1 FROM paper_tags pt JOIN tags t ON t.id=pt.tag_id WHERE pt.paper_id=p.id AND t.namespace=? AND t.value=?)'); params.extend([namespace,value])
if args.outcome:
where.append('p.id '+('IN' if args.outcome=='accepted' else 'NOT IN')+' ('+ACCEPTED_PAPERS+')')
if args.venue or args.year or args.status or args.track or args.event_key is not None:
if args.venue or args.year or args.status or args.track:
clause = ['1=1']
if args.venue:
if conn.execute("SELECT 1 FROM sqlite_master WHERE type='table' AND name='venue_aliases'").fetchone():
clause.append('(lower(v.acronym)=lower(?) OR EXISTS(SELECT 1 FROM venue_aliases va WHERE va.venue_id=v.id AND lower(va.alias)=lower(?)))'); params.extend([args.venue,args.venue])
else:
clause.append('lower(v.acronym)=lower(?)');params.append(args.venue)
if args.event_key is not None:
clause.append('e.event_key=?');params.append(args.event_key)
if args.track:
clause.append('e.track=?');params.append(args.track)
if args.year:
@@ -111,7 +101,7 @@ def main(argv=None, *, prog=None):
paper['tags'] = [dict(r) for r in conn.execute('SELECT t.namespace,t.value,pt.evidence_key FROM paper_tags pt JOIN tags t ON t.id=pt.tag_id WHERE pt.paper_id=?',(row['id'],))]
paper['sources'] = [dict(r) for r in conn.execute('SELECT s.name,r.external_id,r.url,r.title,r.abstract,r.retrieved_at FROM source_records r JOIN sources s ON s.id=r.source_id WHERE r.paper_id=?',(row['id'],))]
submissions = []
for sub in conn.execute('SELECT s.id,s.source_submission_id,s.submitted_at,v.acronym,e.year,e.track,'+event+' AS event_key FROM submissions s JOIN editions e ON e.id=s.edition_id JOIN venues v ON v.id=e.venue_id WHERE s.paper_id=? ORDER BY e.year,s.id',(row['id'],)):
for sub in conn.execute('SELECT s.id,s.source_submission_id,s.submitted_at,v.acronym,e.year,e.track FROM submissions s JOIN editions e ON e.id=s.edition_id JOIN venues v ON v.id=e.venue_id WHERE s.paper_id=? ORDER BY e.year,s.id',(row['id'],)):
submission = dict(sub)
submission['decisions'] = []
for d in conn.execute('SELECT id,status,raw_value,evidence_url,observed_at,decision_date FROM decisions WHERE submission_id=? ORDER BY observed_at,COALESCE(decision_date,observed_at),id',(sub['id'],)):
+69
View File
@@ -7,6 +7,34 @@ from paper_atlas.audits.coverage import report
from paper_atlas.db.store import Store
def add_coverage_evidence(store):
paper, record = store.record('official_metadata', 'known', 'https://example.org/known',
'Known paper with two source observations', 'Complete canonical abstract', ['Jane Doe', 'John Smith'],
{'openreview': 'coverageForum', 'arxiv': '2401.98765'})
edition = store.decision(paper, record, 'COLING+LREC', 2024, 'main', 'known',
'https://example.org/accept', 'accepted', 'Accept', aliases=['COLING', 'LREC'],
identities=[('openreview', 'coverageForum')], observed_at='2025-05-01T00:00:00Z')
same, mirror = store.record('bibliography', 'mirror', 'https://example.org/mirror',
'Known paper with two source observations', None, ['Jane Doe', 'John Smith'], {'openreview': 'coverageForum'})
store.decision(same, mirror, 'COLING+LREC', 2024, 'main', 'mirror', 'https://example.org/older',
'rejected', 'Reject', identities=[('openreview', 'coverageForum')],
observed_at='2025-05-01T00:00:00Z', decision_date='2025-04-30T00:00:00Z')
unknown, unknown_record = store.record('unknown_catalogue', 'unknown', 'https://example.org/unknown',
'Indexed work without a public decision', None, [])
store.decision(unknown, unknown_record, 'COLING+LREC', 2024, 'main', 'unknown',
'https://example.org/unknown', None, '', identities=[('openreview', 'unknownForum')])
same, later = store.record('official_metadata', 'later', 'https://example.org/later',
'Known paper with two source observations', 'Complete canonical abstract', ['Jane Doe', 'John Smith'],
{'openreview': 'coverageNext', 'arxiv': '2401.98765'})
store.decision(same, later, 'COLING+LREC', 2025, 'findings', 'later', 'https://example.org/later',
'accepted', 'Accept', identities=[('openreview', 'coverageNext')], observed_at='2025-06-01T00:00:00Z')
source = store.source('official_metadata', 'https://example.org')
for url, status in [('https://example.org/list', 'complete'), ('https://example.org/identity-refresh', 'partial')]:
store.conn.execute('''INSERT INTO edition_sources(edition_id,source_id,list_url,status,expected_count,imported_count)
VALUES(?,?,?,?,?,?)''', (edition, source, url, status, 1, 1))
store.conn.commit()
class CoverageTests(unittest.TestCase):
def setUp(self):
self.tmp=tempfile.TemporaryDirectory();self.addCleanup(self.tmp.cleanup)
@@ -31,5 +59,46 @@ class CoverageTests(unittest.TestCase):
self.store.conn.commit();coling=report(self.db,self.registry)['venues'][0]
self.assertEqual(coling['imported_submissions'],2);self.assertEqual(coling['distinct_papers'],1)
def test_observations_attempts_and_missing_source_abstracts_stay_separate(self):
add_coverage_evidence(self.store)
result = report(self.db, self.registry)
self.assertEqual(result['engine'], 'sqlite')
self.assertEqual(result['database'], str(self.db))
coling = result['venues'][0]
self.assertEqual((coling['imported_submissions'], coling['distinct_papers']), (3, 2))
edition, findings = coling['editions']
self.assertEqual((edition['submissions'], edition['papers'], edition['papers_without_abstract_text']), (2, 2, 1))
self.assertEqual(edition['latest_observed_status_counts']['accepted'], 1)
self.assertEqual(edition['latest_observed_status_counts']['rejected'], 0)
self.assertEqual(edition['latest_observed_status_counts']['unknown'], 1)
self.assertEqual(edition['decision_observation_counts']['accepted'], 1)
self.assertEqual(edition['decision_observation_counts']['rejected'], 1)
self.assertEqual(edition['decision_observation_counts']['unknown'], 0)
counts = {row['source']: row for row in edition['source_record_counts']}
self.assertEqual(counts['bibliography']['source_records_without_abstract_text'], 1)
self.assertEqual(counts['official_metadata']['source_records'], 1)
self.assertEqual(len(edition['sources']), 2)
self.assertEqual(findings['track'], 'findings')
self.assertEqual(result['imported_venues_outside_registry'], [])
def test_missing_sqlite_audit_does_not_create_a_database(self):
path = self.root / 'absent.sqlite'
with self.assertRaisesRegex(ValueError, 'Existing database'):
report(path, self.registry)
self.assertFalse(path.exists())
def test_empty_editions_remain_visible_after_shared_aggregation(self):
self.store.conn.execute("INSERT INTO venues(acronym,name,field,venue_type) VALUES('AAAI','AAAI','general_ai','conference')")
venue = self.store.conn.execute("SELECT id FROM venues WHERE acronym='AAAI'").fetchone()[0]
self.store.conn.execute("INSERT INTO editions(venue_id,year,track) VALUES(?,2026,'main')", (venue,))
self.store.conn.commit()
aaai = report(self.db, self.registry)['venues'][1]
self.assertEqual(aaai['history_status'], 'no_imported_records')
self.assertEqual(len(aaai['editions']), 1)
edition = aaai['editions'][0]
self.assertEqual((edition['submissions'], edition['papers'], edition['papers_without_abstract_text']), (0, 0, 0))
self.assertEqual(sum(edition['latest_observed_status_counts'].values()), 0)
self.assertEqual(edition['source_record_counts'], [])
if __name__=='__main__':unittest.main()
-202
View File
@@ -1,202 +0,0 @@
from contextlib import closing, redirect_stdout, contextmanager
import io
import json
import os
from pathlib import Path
import sqlite3
import tempfile
import unittest
import uuid
from importlib.resources import files
from paper_atlas.db.store import Store
from paper_atlas.db.backend import open_store
from paper_atlas.db.events import has_event_key
from paper_atlas.collectors.dblp import XML_SHA
from paper_atlas.ingestion.event_identity import plan, upgrade, exact_counts
from paper_atlas.ingestion.records import ingest_file
from paper_atlas.ingestion.backfill import backfill
from paper_atlas.postgres.client import connect
from paper_atlas.postgres.schema import quote
from paper_atlas.postgres.migration import migrate
from paper_atlas import querying
@contextmanager
def opened_store(**kwargs):
store=open_store(**kwargs)
try:
yield store
finally:
store.conn.close()
def legacy(db):
sql = files('paper_atlas.db').joinpath('schema.sql').read_text().replace(" event_key TEXT NOT NULL DEFAULT '',\n", '').replace('UNIQUE(venue_id,year,track,event_key)', 'UNIQUE(venue_id,year,track)')
c = sqlite3.connect(db); c.executescript(sql); c.close()
s = Store(db)
p,r = s.record('dblp','conf/www/Fall95','https://example.org/fall','Same paper in two events',
'Abstract\x00with\x01text',['A Person'],{'arxiv':'2501.00001'})
s.record_tags(p,r,'dblp',[{'namespace':'dblp:booktitle','value':'WWW (Fall)'}])
s.decision(p,r,'Legacy',1995,'main','conf/www/Fall95','https://example.org/accept','accepted','Accept')
s.conn.execute("UPDATE venues SET acronym='WWW',name='WWW'")
meta={'snapshot_sha256':XML_SHA,'proceedings_key':'conf/www/1995f','bibliographic_year':1995,
'bibliography':{'booktitle':['WWW (Fall)'],'url':['db/conf/www/www1995f.html#Fall95']}}
s.conn.execute('UPDATE source_records SET metadata_json=?',(json.dumps(meta),));s.conn.commit();s.conn.close()
return p,r
def add(store, external, event=None, status='accepted', venue='WWW', year=1995):
p,r = store.record('fixture',external,'https://example.org/'+external,'Same paper in two events',
'Abstract\x00with\x01text',['A Person'],{'arxiv':'2501.00001'})
edition = store.decision(p,r,venue,year,'main',external,'https://example.org/'+status,status,status,event_key=event)
return p,r,edition
def file(root, name, rows, event=None):
p=root/(name+'.jsonl');p.write_text(''.join(json.dumps(r)+'\n'for r in rows))
manifest={'source':'fixture','venue':'WWW','year':1995,'track':'main','count':len(rows),'list_url':'https://example.org/'+name}
if event is not None:manifest['event_key']=event
p.with_suffix('.manifest.json').write_text(json.dumps(manifest));return p
class EventIdentityTests(unittest.TestCase):
def setUp(self):
t=tempfile.TemporaryDirectory();self.addCleanup(t.cleanup);self.root=Path(t.name);self.db=self.root/'sample.sqlite'
def test_same_paper_distinct_events_keep_both_attempts_and_decisions(self):
s=Store(self.db);self.addCleanup(s.conn.close)
paper,_,spring=add(s,'spring','www-1995-spring','rejected');_,_,fall=add(s,'fall','www-1995-fall')
s.conn.commit();self.assertNotEqual(spring,fall)
with redirect_stdout(io.StringIO())as out:querying.main(['--db',str(self.db),'--paper',str(paper)])
row=json.loads(out.getvalue())[0];self.assertEqual({a['event_key']for a in row['submissions']},{'www-1995-spring','www-1995-fall'})
self.assertEqual([a['event_key']for a in row['known_acceptances']],['www-1995-fall'])
self.assertEqual({a['latest_status']for a in row['submissions']},{'rejected','accepted'})
with redirect_stdout(io.StringIO())as out:querying.main(['--db',str(self.db),'--venue','WWW','--event-key','www-1995-spring','--status','rejected'])
self.assertEqual(len(json.loads(out.getvalue())),1)
def test_explicit_migration_preserves_ids_history_and_source_bytes(self):
paper,record=legacy(self.db);proposal=plan(self.db);self.assertFalse(proposal['before']['event_column'])
result=upgrade(proposal,self.db);self.assertEqual(result['updated_editions'],1)
self.assertEqual(result['after']['protected'],proposal['before']['protected'])
self.assertEqual(result['after']['editions_sha256'],proposal['before']['editions_sha256'])
self.assertEqual(upgrade(proposal,self.db)['status'],'already_applied')
s=Store(self.db);self.addCleanup(s.conn.close)
self.assertEqual(s.conn.execute('SELECT id,event_key FROM editions').fetchall(),[(1,'www-1995-fall')])
# An old file without event_key still has its original source anchor.
self.assertEqual(s.decision(paper,record,'WWW',1995,'main','conf/www/Fall95','https://example.org/accept','accepted','Accept'),1)
self.assertEqual(s.conn.execute('SELECT count(*) FROM submissions').fetchone()[0],1)
self.assertEqual(s.conn.execute('PRAGMA foreign_key_check').fetchall(),[])
def test_unverified_legacy_volume_is_not_automatically_labelled(self):
legacy(self.db)
with sqlite3.connect(self.db)as c:c.execute("UPDATE source_records SET metadata_json='{}'")
with self.assertRaisesRegex(ValueError,'complete pinned Fall'):plan(self.db)
with sqlite3.connect(self.db)as c:self.assertFalse(has_event_key(c))
def test_stale_plan_rolls_back_before_schema_change(self):
legacy(self.db);proposal=plan(self.db)
with sqlite3.connect(self.db)as c:c.execute("UPDATE editions SET track='unspecified'")
with self.assertRaisesRegex(ValueError,'stale'):upgrade(proposal,self.db)
with sqlite3.connect(self.db)as c:self.assertFalse(has_event_key(c));self.assertEqual(c.execute('SELECT track FROM editions').fetchone()[0],'unspecified')
def test_unscoped_source_and_wrong_refresh_event_fail(self):
s=Store(self.db);self.addCleanup(s.conn.close);_,r,e=add(s,'first','www-1995-fall');s.conn.commit()
p,r2=s.record('fixture','unscoped','https://example.org/u','Other work',None,[])
with self.assertRaisesRegex(ValueError,'event_key'):s.decision(p,r2,'WWW',1995,'main','unscoped','https://example.org/u','accepted','Accept')
with self.assertRaisesRegex(ValueError,'Cannot move'):s.decision(p,r,'WWW',1995,'main','first','https://example.org/u','accepted','Accept',event_key='www-1995-spring')
self.assertEqual(s.conn.execute('SELECT count(*) FROM editions').fetchone()[0],1)
def test_pinned_fall_cannot_claim_spring(self):
p,r=legacy(self.db);upgrade(plan(self.db),self.db);s=Store(self.db);self.addCleanup(s.conn.close)
with self.assertRaisesRegex(ValueError,'pinned WWW Fall'):s.decision(p,r,'WWW',1995,'main','conf/www/Fall95','https://example.org/u','accepted','Accept',event_key='www-1995-spring')
def test_manifest_event_mismatch_rolls_back_the_whole_file(self):
s=Store(self.db);s.conn.close()
base={'source':'fixture','venue':'WWW','year':1995,'track':'main','status':'accepted','title':'Input work','url':'https://example.org/p','authors':[]}
path=file(self.root,'bad',[dict(base,external_id='a',event_key='www-1995-spring'),dict(base,external_id='b',event_key='www-1995-fall')],'www-1995-spring')
with self.assertRaisesRegex(ValueError,'edition differs'):ingest_file(self.db,path)
with sqlite3.connect(self.db)as c:
self.assertEqual(c.execute('SELECT count(*) FROM papers').fetchone()[0],0)
self.assertEqual(c.execute('SELECT count(*) FROM editions').fetchone()[0],0)
def test_backfill_selects_the_explicit_event_and_preserves_attempts(self):
s=Store(self.db);add(s,'spring','www-1995-spring','rejected');add(s,'fall','www-1995-fall');s.conn.commit();s.conn.close()
row={'source':'fixture','external_id':'fall','venue':'WWW','year':1995,'track':'main','event_key':'www-1995-fall','status':'accepted','identifiers':{'openreview':'forumFall'}}
path=file(self.root,'backfill',[row],'www-1995-fall')
with redirect_stdout(io.StringIO()):result=backfill(self.db,[path])
self.assertEqual(result['submissions_after'],2)
with sqlite3.connect(self.db)as c:
self.assertEqual(c.execute("SELECT e.event_key FROM submission_identifiers si JOIN submissions s ON s.id=si.submission_id JOIN editions e ON e.id=s.edition_id WHERE si.scheme='openreview' AND si.value='forumFall'").fetchone()[0],'www-1995-fall')
def test_exact_paged_counts_cover_composite_key_boundaries(self):
s=Store(self.db);self.addCleanup(s.conn.close)
for i in range(7):add(s,'entry'+str(i),'www-1995-fall')
s.conn.commit();events=[];counts=exact_counts(s.conn,page_size=2,progress=events.append)
self.assertEqual(counts['source_records'],7)
self.assertEqual(counts['identifiers'],8)
self.assertEqual(counts['submission_sources'],7)
self.assertEqual([e['rows_counted']for e in events if e['table']=='identifiers'and e['complete']],[8])
def test_legacy_single_event_writes_and_reads_remain_available(self):
legacy(self.db);s=Store(self.db);self.addCleanup(s.conn.close)
add(s,'ordinary',venue='COLM',year=2025);s.conn.commit()
with redirect_stdout(io.StringIO())as out:querying.main(['--db',str(self.db),'--venue','COLM'])
self.assertEqual(json.loads(out.getvalue())[0]['known_acceptances'][-1]['event_key'],'')
with self.assertRaisesRegex(ValueError,'migration required'):
querying.main(['--db',str(self.db),'--event-key','www-1995-fall'])
def test_unexpected_extra_edition_column_requires_review(self):
legacy(self.db)
with sqlite3.connect(self.db)as c:c.execute('ALTER TABLE editions ADD COLUMN custom_data TEXT')
with self.assertRaisesRegex(ValueError,'Unexpected edition schema'):plan(self.db)
def test_file_spanning_two_events_without_manifest_key_rolls_back(self):
Store(self.db).conn.close()
base={'source':'fixture','venue':'WWW','year':1995,'track':'main','status':'accepted','title':'Input work','url':'https://example.org/p','authors':[]}
path=file(self.root,'two',[dict(base,external_id='a',event_key='www-1995-spring'),dict(base,external_id='b',event_key='www-1995-fall')])
with self.assertRaisesRegex(ValueError,'exactly one'):ingest_file(self.db,path)
with sqlite3.connect(self.db)as c:self.assertEqual(c.execute('SELECT count(*) FROM submissions').fetchone()[0],0)
def test_cutover_sqlite_backup_remains_protected(self):
legacy(self.db);proposal=plan(self.db);Path(str(self.db.resolve())+'.postgresql-cutover.json').write_text('{}')
with self.assertRaisesRegex(RuntimeError,'cut over'):upgrade(proposal,self.db)
@unittest.skipUnless(os.environ.get('PAPER_ATLAS_TEST_PG_SERVICE'),'Requires approved remote PostgreSQL test service')
class PostgreSQLEventIdentityTests(unittest.TestCase):
def setUp(self):
self.service=os.environ['PAPER_ATLAS_TEST_PG_SERVICE'];self.schema='pa_event_'+uuid.uuid4().hex[:12]
t=tempfile.TemporaryDirectory();self.addCleanup(t.cleanup);self.root=Path(t.name);self.db=self.root/'seed.sqlite';legacy(self.db)
self.addCleanup(self.cleanup)
with redirect_stdout(io.StringIO()):migrate(self.db,self.service,self.root/'migrate.json',schema=self.schema,min_free_gib=0)
def cleanup(self):
with connect(self.service)as c:
for (name,)in c.execute('SELECT nspname FROM pg_namespace WHERE starts_with(nspname,%s)',(self.schema,)).fetchall():c.execute('DROP SCHEMA '+quote(name)+' CASCADE')
def test_native_upgrade_preserves_ids_and_codec_then_accepts_separate_event(self):
proposal=plan(pg_service=self.service,pg_schema=self.schema)
result=upgrade(proposal,pg_service=self.service,pg_schema=self.schema)
self.assertEqual(result['after']['protected'],proposal['before']['protected'])
self.assertEqual(upgrade(proposal,pg_service=self.service,pg_schema=self.schema)['status'],'already_applied')
with opened_store(pg_service=self.service,pg_schema=self.schema)as s:
paper,_,spring=add(s,'spring','www-1995-spring','rejected');s.conn.commit()
self.assertNotEqual(spring,1)
self.assertEqual(s.conn.execute('SELECT abstract FROM papers WHERE id=?',(paper,)).fetchone()[0],'Abstract\x00with\x01text')
with redirect_stdout(io.StringIO())as out:querying.main(['--pg-service',self.service,'--pg-schema',self.schema,'--paper',str(paper)])
row=json.loads(out.getvalue())[0];self.assertEqual(len(row['submissions']),2);self.assertEqual(len(row['known_acceptances']),1)
def test_native_paged_counts_preserve_encoded_composite_key_order(self):
with opened_store(pg_service=self.service,pg_schema=self.schema)as s:
for value in ['a\x00b','a\x01b','a\x02b','z']:
s.conn.execute('INSERT INTO identifiers(scheme,value,paper_id) VALUES(?,?,?)',('custom',value,1))
s.conn.commit();counts=exact_counts(s.conn,page_size=2)
self.assertEqual(counts['identifiers'],6)
self.assertEqual(counts['submissions'],1)
def test_stale_native_plan_is_rejected_and_lock_released(self):
proposal=plan(pg_service=self.service,pg_schema=self.schema)
with opened_store(pg_service=self.service,pg_schema=self.schema)as s:s.conn.execute("UPDATE editions SET track='unspecified'");s.conn.commit()
with self.assertRaisesRegex(ValueError,'stale'):upgrade(proposal,pg_service=self.service,pg_schema=self.schema)
with opened_store(pg_service=self.service,pg_schema=self.schema)as s:self.assertFalse(has_event_key(s.conn))
+44
View File
@@ -243,6 +243,50 @@ class PostgreSQLIngestionTests(unittest.TestCase):
finally:
reader.close()
def test_coverage_matches_sqlite_with_history_aliases_and_missing_source_abstracts(self):
from paper_atlas.audits.coverage import report
from tests.test_coverage_report import add_coverage_evidence
registry = self.root / 'venues.json'
registry.write_text(json.dumps({'scope_note': 'Candidate scope', 'venues': [
{'acronym': 'coling', 'field': 'language'}, {'acronym': 'AAAI', 'field': 'general_ai'}]}))
sample = Store(self.root / 'seed.sqlite')
try:
add_coverage_evidence(sample)
finally:
sample.conn.close()
store = self.store()
try:
add_coverage_evidence(store)
finally:
store.conn.close()
sqlite_report = report(self.root / 'seed.sqlite', registry)
observed = []
def reader(*args, **kwargs):
connection = open_read_connection(*args, **kwargs)
observed.append((connection.execute('SHOW transaction_read_only').fetchone()[0],
connection.execute('SHOW transaction_isolation').fetchone()[0]))
return connection
with patch('paper_atlas.audits.coverage.open_read_connection', side_effect=reader):
actual = report(None, registry, pg_service=self.service, pg_schema=self.schema)
self.assertEqual(observed, [('on', 'repeatable read')])
self.assertEqual(actual['engine'], 'postgresql')
self.assertEqual(actual['schema'], self.schema)
self.assertEqual(actual['pg_service'], self.service)
def content(result):
values = json.loads(json.dumps(result['venues']))
for venue in values:
for edition in venue['editions']:
for key in ('id', 'venue_id'):
edition.pop(key)
return values
self.assertEqual(content(actual), content(sqlite_report))
self.assertEqual([r['acronym'] for r in actual['imported_venues_outside_registry']], ['ICLR'])
edition = actual['venues'][0]['editions'][0]
self.assertEqual(edition['latest_observed_status_counts']['accepted'], 1)
self.assertEqual(edition['latest_observed_status_counts']['unknown'], 1)
self.assertEqual(edition['decision_observation_counts']['rejected'], 1)
self.assertEqual(edition['papers_without_abstract_text'], 1)
def test_backfill_merges_evidence_without_reimporting_or_losing_history(self):
files = []
for source, external, title in [('official', 'legacy', 'First bibliographic name'), ('openreview_snapshot', 'forum', 'Renamed submission')]:
+1 -1
View File
@@ -133,7 +133,7 @@ class SubmissionTests(unittest.TestCase):
c.execute("INSERT INTO papers(id,title,title_key) VALUES(1,'Paper','paper')")
c.execute("INSERT INTO source_records VALUES(1,1,'paper',1,'https://example.org/p','Paper','Abstract','[]','{}',CURRENT_TIMESTAMP)")
c.execute("INSERT INTO venues VALUES(1,'ICLR','ICLR','machine_learning','conference')")
c.execute("INSERT INTO editions(id,venue_id,year,track) VALUES(1,1,2026,'main')")
c.execute("INSERT INTO editions VALUES(1,1,2026,'main')")
c.execute("INSERT INTO submissions VALUES(1,1,1,1,'paper',NULL)")
c.execute("INSERT INTO decisions VALUES(1,1,'accepted','Accept','https://example.org/decision','2026-01-01T00:00:00Z',NULL)")
c.commit();c.close()